https://wiki.sleep.ru.is/ 2026-04-30T17:53:32+00:00 https://wiki.sleep.ru.is/ https://wiki.sleep.ru.is/lib/exe/fetch.php?media=wiki:logo.png text/html 2022-10-25T11:15:56+00:00 Anonymous (anonymous@undisclosed.example.com) https://wiki.sleep.ru.is/doku.php?id=cluster:usage_tips:git&rev=1666696556&do=diff Using GitHub for Collaborative Coding on the Cluster How-to-Guide for connecting your GitHub account to the cluster, creating a new repository, cloning it to the cluster and collaborating on the cluster. 1. Step: Connect Github Account Connect your Github account to the cluster (more detailed info see: text/html 2023-03-16T08:48:34+00:00 Anonymous (anonymous@undisclosed.example.com) https://wiki.sleep.ru.is/doku.php?id=cluster:usage_tips:jupyter&rev=1678956514&do=diff Jupyter Jupyter is a notebook-based development platform for Python projects, widely used in machine learning projects. JuypyterHub is a service that provides Jypyter notebooks for users on a given machine. Currently, one jupyterHub server is accessible for Sleep Revolution researchers on the computing hub Dunwich. text/html 2022-11-28T05:48:38+00:00 Anonymous (anonymous@undisclosed.example.com) https://wiki.sleep.ru.is/doku.php?id=cluster:usage_tips:mlflow&rev=1669614518&do=diff Tracking Machine Learning Experiments with ML Flow How-to-Guide for setting up and connecting to ML Flow, tracking experiments and analysing them. ML Flow Structure: Installing ML Flow 1) Install MLflow to lukaenv (conda activate your-custom-environment) text/html 2022-05-16T23:04:10+00:00 Anonymous (anonymous@undisclosed.example.com) https://wiki.sleep.ru.is/doku.php?id=cluster:usage_tips:python&rev=1652742250&do=diff Python Remote Development Sleep Revolution projects that depend on data sets hosted on the Reykjavík University cluster during development will benefit greatly from having access to the data sets through a modern project IDE such as PyCharm. This guide outlines how you can configure PyCharm to execute code on a remote machine while at the same time ensuring that the development environment stays identical to what you would use for local development. text/html 2022-09-30T13:01:01+00:00 Anonymous (anonymous@undisclosed.example.com) https://wiki.sleep.ru.is/doku.php?id=cluster:usage_tips:sharing_data&rev=1664542861&do=diff Sharing Data / Research To share data with other users please contact benedikt (benedikthth@ru.is or by coming down to his desk on the 2. floor in RU) and ask him to create a folder for you and your group. To be allowed to create a group the following information is needed: text/html 2025-08-07T13:44:01+00:00 Anonymous (anonymous@undisclosed.example.com) https://wiki.sleep.ru.is/doku.php?id=cluster:usage_tips:slurm&rev=1754574241&do=diff Slurm running The slurm cluster is a queue-based job system for long-running processes such as training machine learning models and other heavy processing jobs. To get access to the slurm cluster, please contact the cluster management team. Getting started : Slurm cluster text/html 2021-11-04T17:50:03+00:00 Anonymous (anonymous@undisclosed.example.com) https://wiki.sleep.ru.is/doku.php?id=cluster:usage_tips:ssh_tricks&rev=1636048203&do=diff SSH tricks & tips text/html 2025-08-11T11:16:42+00:00 Anonymous (anonymous@undisclosed.example.com) https://wiki.sleep.ru.is/doku.php?id=cluster:usage_tips:startslurm&rev=1754911002&do=diff Getting started with the Sleep Revolution slurm cluster Slurm is a workload manager,scheduler system. It's build from computer nodes, 1 node is the Login Node, a master node and worker node's The login node is called cheetah.sleep.ru.is 130.208.209.30 text/html 2022-11-02T06:29:59+00:00 Anonymous (anonymous@undisclosed.example.com) https://wiki.sleep.ru.is/doku.php?id=cluster:usage_tips:visual-studio&rev=1667370599&do=diff How to connect Visual Studio Code with the cluster You might want to use Visual Studio (VS) Code for coding on cluster instead of the jupyter lab environment provided as standard. VS Code has many advantages over the standard jupyter lab application programming interface such as integrated variable inspector, graphical source control for git as well as many other user friendly configurations and smart coding extensions. text/html 2025-02-19T12:52:30+00:00 Anonymous (anonymous@undisclosed.example.com) https://wiki.sleep.ru.is/doku.php?id=cluster:usage_tips:vpn&rev=1739969550&do=diff VPN A virtual private network (VPN) extends a private network across a public network and enables users to send and receive data across shared or public networks as if their computing devices were directly connected to the private network. The benefits of a VPN include increases in functionality, security, and management of the private network. It provides access to resources inaccessible on the public network and is typically used for telecommuting workers. Encryption is common, although not a…