cluster:usage_tips:startslurm

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cluster:usage_tips:startslurm [2025/08/07 14:29] – bjorncluster:usage_tips:startslurm [2025/08/11 11:16] (current) – bjorn
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 \\ \\
 Open a terminal to log-in '' ssh <myUser>@cheetah.sleep.ru.is''\\ Open a terminal to log-in '' ssh <myUser>@cheetah.sleep.ru.is''\\
 +Those who use Rivendell ''130.208.209.30'' (and other sleep servers) can also connect with any editor which supports SSH like [[https://code.visualstudio.com/|VScode]]\\
 ==== About the user environment : ==== ==== About the user environment : ====
 Each user has his home folder, the path is [/mount/home/<username>]\\ Each user has his home folder, the path is [/mount/home/<username>]\\
-The home should have 2 files, a readMe.lst file and template (slurm) script file (exampleJob.sh)\\+The home folder should have 2 files, a readMe.lst file and template (slurm) script file (exampleJob.sh)\\
  
   - The first step for users is to make sure their working environment fits their needs.\\ For those who are using Python, we recommend, for ease of use, using a Python virtual environment\\ User can then install different version of Python and all necessary modules for their work.\\   - The first step for users is to make sure their working environment fits their needs.\\ For those who are using Python, we recommend, for ease of use, using a Python virtual environment\\ User can then install different version of Python and all necessary modules for their work.\\
   - However user can setup and install their Python modules locally without a Python virtual environment, by using Pip3 install <Module>\\   - However user can setup and install their Python modules locally without a Python virtual environment, by using Pip3 install <Module>\\
-  - Every user needs to use a script file for instructing the cluster what to do\\ +  - The cluster gives users access to memory, cpu and GPU. The script file has instructing the slurm cluster what to do\\ 
-  - The cluster gives users access to memory, cpu and GPU. To execute your job on the cluster, first update exampleJob.sh to run your code (or make a copy)\\ Then submit your job to the queue with command **sbatch exampleJob.sh**+  - Users can change the slurm instructions in the script file, but it's not necessary for it to work, just append your command to it. 
 +  - A example of how to execute your job on the cluster; first create a file __prufa.py__ in your home directory, append the line ''python3 prufa.py'' to exampleJob.sh \\ Then submit your job to the queue with command **sbatch exampleJob.sh**
  
 \\ \\
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 Miniconda\\ Miniconda\\
 Aaconda\\ Aaconda\\
 +
 +[[cluster:usage_tips:advancedSlurm|Advanced tips]]\\
  • cluster/usage_tips/startslurm.1754576988.txt.gz
  • Last modified: 2025/08/07 14:29
  • by bjorn